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CAZyme Information: PHYCI_92856T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_92856T0-p1 | |||||||||||
| CAZy Family | GT58 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH6 | 40 | 297 | 3.6e-59 | 0.9489795918367347 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396075 | Glyco_hydro_6 | 1.65e-42 | 47 | 301 | 2 | 292 | Glycosyl hydrolases family 6. |
| 227616 | CelA1 | 1.94e-14 | 85 | 373 | 180 | 477 | Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism]. |
| 236776 | PRK10856 | 7.13e-06 | 335 | 448 | 147 | 254 | cytoskeleton protein RodZ. |
| 237874 | PRK14971 | 2.31e-05 | 375 | 459 | 375 | 457 | DNA polymerase III subunit gamma/tau. |
| 411418 | ser_rich_anae_1 | 4.93e-05 | 290 | 436 | 236 | 384 | serine-rich protein. This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.23e-158 | 25 | 344 | 18 | 341 | |
| 5.26e-91 | 11 | 332 | 8 | 335 | |
| 9.65e-85 | 26 | 328 | 20 | 324 | |
| 6.28e-81 | 34 | 344 | 25 | 325 | |
| 7.32e-80 | 29 | 331 | 21 | 331 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.36e-27 | 93 | 305 | 70 | 274 | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca] |
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| 7.56e-26 | 93 | 305 | 70 | 274 | Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca [Thermobifida fusca],2BOF_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose [Thermobifida fusca],2BOG_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside [Thermobifida fusca] |
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| 4.27e-25 | 93 | 307 | 73 | 282 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv] |
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| 4.27e-25 | 93 | 307 | 73 | 282 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv] |
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| 6.22e-25 | 93 | 307 | 94 | 303 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom [Mycobacterium tuberculosis H37Rv] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.33e-27 | 64 | 294 | 75 | 301 | Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1 |
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| 7.44e-26 | 93 | 308 | 238 | 438 | Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1 |
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| 2.33e-25 | 93 | 305 | 101 | 305 | Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2 |
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| 8.81e-23 | 83 | 316 | 73 | 340 | Endoglucanase-6B OS=Humicola insolens OX=34413 GN=cel6B PE=1 SV=1 |
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| 1.39e-22 | 45 | 305 | 97 | 348 | Endoglucanase 1 OS=Streptomyces sp. (strain KSM-9) OX=74575 GN=casA PE=1 SV=3 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.003434 | 0.996546 | CS pos: 28-29. Pr: 0.9554 |