logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHYCI_92855T0-p1

You are here: Home > Sequence: PHYCI_92855T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_92855T0-p1
CAZy Family GT57
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
457 PcinCBS144-22_SC0040|CGC1 48101.11 4.6654
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_92855T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 37 295 5.3e-59 0.9523809523809523

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 3.38e-44 44 299 1 292
Glycosyl hydrolases family 6.
227616 CelA1 2.25e-14 80 304 177 399
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].
282904 Herpes_BLLF1 2.23e-05 357 443 469 556
Herpes virus major outer envelope glycoprotein (BLLF1). This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
236776 PRK10856 2.27e-05 359 446 148 232
cytoskeleton protein RodZ.
236776 PRK10856 2.46e-05 352 425 174 249
cytoskeleton protein RodZ.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-134 27 338 22 334
3.87e-96 1 326 1 332
6.06e-85 20 323 16 321
1.19e-83 27 335 21 337
8.91e-78 32 318 25 300

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.22e-31 52 311 36 314
GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102]
1.71e-28 91 296 70 270
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca]
3.03e-27 91 296 70 270
Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca [Thermobifida fusca],2BOF_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose [Thermobifida fusca],2BOG_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside [Thermobifida fusca]
6.93e-24 91 303 73 280
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv]
6.93e-24 91 303 73 280
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.03e-26 91 296 101 301
Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2
3.03e-26 37 292 50 301
Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1
1.31e-25 91 306 238 438
Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1
4.43e-23 47 319 128 446
1,4-beta-D-glucan cellobiohydrolase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cbhC PE=1 SV=2
7.27e-23 60 296 113 343
Endoglucanase 1 OS=Streptomyces sp. (strain KSM-9) OX=74575 GN=casA PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000747 0.999250 CS pos: 26-27. Pr: 0.9403

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_92855T0-p1.