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CAZyme Information: PHYCI_92366T0-p1

You are here: Home > Sequence: PHYCI_92366T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_92366T0-p1
CAZy Family GT49
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
284 29594.20 6.2253
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_92366T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 23 190 5.7e-23 0.9880239520958084

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 1.59e-08 93 191 87 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.14e-16 20 195 15 190
2.14e-16 20 195 15 190
4.15e-16 7 196 5 195
1.07e-15 10 196 8 195
5.07e-15 11 200 5 192

PDB Hits      help

PHYCI_92366T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYCI_92366T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.311316 0.688676 CS pos: 22-23. Pr: 0.6404

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_92366T0-p1.