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CAZyme Information: PHYCI_91747T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_91747T0-p1 | |||||||||||
| CAZy Family | GT48 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:3 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 15 | 545 | 2.5e-108 | 0.9726277372262774 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 3.77e-33 | 20 | 553 | 5 | 539 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 4.22e-18 | 21 | 324 | 4 | 298 | choline dehydrogenase; Validated |
| 366272 | GMC_oxred_N | 5.25e-15 | 105 | 324 | 19 | 215 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 238533 | APPLE_Factor_XI_like | 6.03e-13 | 642 | 712 | 3 | 72 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| 238533 | APPLE_Factor_XI_like | 2.41e-11 | 574 | 637 | 11 | 73 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.52e-266 | 5 | 636 | 8 | 637 | |
| 4.00e-212 | 9 | 877 | 10 | 883 | |
| 1.32e-200 | 4 | 863 | 3 | 869 | |
| 7.84e-145 | 11 | 529 | 10 | 526 | |
| 1.80e-137 | 4 | 555 | 3 | 557 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.75e-49 | 18 | 421 | 3 | 415 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 1.86e-48 | 23 | 421 | 3 | 410 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 1.56e-38 | 22 | 553 | 7 | 544 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 6.34e-38 | 7 | 553 | 214 | 766 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 5.30e-34 | 14 | 523 | 221 | 738 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.78e-47 | 18 | 421 | 230 | 642 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 6.13e-15 | 19 | 545 | 3 | 531 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
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| 2.58e-14 | 23 | 294 | 2 | 273 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1 |
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| 5.41e-13 | 23 | 294 | 2 | 273 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1 |
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| 3.42e-12 | 18 | 298 | 85 | 359 | Ecdysone oxidase OS=Drosophila melanogaster OX=7227 GN=Eo PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000360 | 0.999633 | CS pos: 20-21. Pr: 0.9772 |