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CAZyme Information: PHYCI_85403T0-p1

You are here: Home > Sequence: PHYCI_85403T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_85403T0-p1
CAZy Family GT20
CAZyme Description Thioredoxin reductase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
831 90756.44 4.8572
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_85403T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 687 828 6.5e-41 0.5510204081632653

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
185416 PTZ00052 0.0 171 654 1 483
thioredoxin reductase; Provisional
273624 TGR 0.0 174 654 1 473
thioredoxin and glutathione reductase selenoprotein. This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
235701 PRK06116 1.62e-151 172 648 1 449
glutathione reductase; Validated
224169 Lpd 7.46e-112 172 648 1 453
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component or related enzyme [Energy production and conversion].
215301 PLN02546 2.92e-102 155 657 59 540
glutathione reductase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 830 1 856
0.0 1 830 1 841
6.10e-109 656 830 27 201
3.11e-93 685 830 1 146
3.27e-47 666 830 12 175

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.65e-174 173 654 10 488
Mammalian thioredoxin reductase [Rattus norvegicus],1H6V_B Mammalian thioredoxin reductase [Rattus norvegicus],1H6V_C Mammalian thioredoxin reductase [Rattus norvegicus],1H6V_D Mammalian thioredoxin reductase [Rattus norvegicus],1H6V_E Mammalian thioredoxin reductase [Rattus norvegicus],1H6V_F Mammalian thioredoxin reductase [Rattus norvegicus]
9.29e-174 173 654 10 488
Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail [Rattus norvegicus],3EAN_B Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail [Rattus norvegicus],3EAN_C Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail [Rattus norvegicus],3EAN_D Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail [Rattus norvegicus],3EAN_E Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail [Rattus norvegicus],3EAN_F Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with reduced C-terminal tail [Rattus norvegicus],3EAO_A Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail [Rattus norvegicus],3EAO_B Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail [Rattus norvegicus],3EAO_C Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail [Rattus norvegicus],3EAO_D Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail [Rattus norvegicus],3EAO_E Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail [Rattus norvegicus],3EAO_F Crystal structure of recombinant rat selenoprotein thioredoxin reductase 1 with oxidized C-terminal tail [Rattus norvegicus],4KPR_A Tetrameric form of rat selenoprotein thioredoxin reductase 1 [Rattus norvegicus],4KPR_B Tetrameric form of rat selenoprotein thioredoxin reductase 1 [Rattus norvegicus],4KPR_E Tetrameric form of rat selenoprotein thioredoxin reductase 1 [Rattus norvegicus],4KPR_F Tetrameric form of rat selenoprotein thioredoxin reductase 1 [Rattus norvegicus]
5.56e-173 173 663 32 520
Crystal structure of human thioredoxin reductase 1 [Homo sapiens],2CFY_B Crystal structure of human thioredoxin reductase 1 [Homo sapiens],2CFY_C Crystal structure of human thioredoxin reductase 1 [Homo sapiens],2CFY_D Crystal structure of human thioredoxin reductase 1 [Homo sapiens],2CFY_E Crystal structure of human thioredoxin reductase 1 [Homo sapiens],2CFY_F Crystal structure of human thioredoxin reductase 1 [Homo sapiens]
1.69e-172 173 654 24 502
Crystal structure of human thioredoxin reductase I (SeCys 498 Cys) [Homo sapiens],2ZZ0_B Crystal structure of human thioredoxin reductase I (SeCys 498 Cys) [Homo sapiens],2ZZ0_C Crystal structure of human thioredoxin reductase I (SeCys 498 Cys) [Homo sapiens],2ZZ0_D Crystal structure of human thioredoxin reductase I (SeCys 498 Cys) [Homo sapiens],2ZZB_A Crystal structure of human thioredoxin reductase I and terpyridine platinum(II) [Homo sapiens],2ZZB_B Crystal structure of human thioredoxin reductase I and terpyridine platinum(II) [Homo sapiens],2ZZB_C Crystal structure of human thioredoxin reductase I and terpyridine platinum(II) [Homo sapiens],2ZZB_D Crystal structure of human thioredoxin reductase I and terpyridine platinum(II) [Homo sapiens],2ZZC_A Crystal structure of NADP(H):human thioredoxin reductase I [Homo sapiens],2ZZC_B Crystal structure of NADP(H):human thioredoxin reductase I [Homo sapiens],2ZZC_C Crystal structure of NADP(H):human thioredoxin reductase I [Homo sapiens],2ZZC_D Crystal structure of NADP(H):human thioredoxin reductase I [Homo sapiens]
2.07e-172 173 654 30 508
Crystal structure of the human thioredoxin reductase-thioredoxin complex [Homo sapiens],3QFA_B Crystal structure of the human thioredoxin reductase-thioredoxin complex [Homo sapiens],3QFB_A Crystal structure of the human thioredoxin reductase-thioredoxin complex [Homo sapiens],3QFB_B Crystal structure of the human thioredoxin reductase-thioredoxin complex [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.78e-173 173 654 10 488
Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5
9.55e-173 174 654 11 488
Thioredoxin reductase 1, cytoplasmic OS=Bos taurus OX=9913 GN=TXNRD1 PE=2 SV=3
3.81e-172 173 654 10 488
Thioredoxin reductase 1, cytoplasmic OS=Pongo abelii OX=9601 GN=TXNRD1 PE=2 SV=3
1.22e-170 173 654 124 602
Thioredoxin reductase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Txnrd1 PE=1 SV=3
1.71e-170 167 654 4 488
Thioredoxin reductase 1, cytoplasmic OS=Sus scrofa OX=9823 GN=TXNRD1 PE=2 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000079 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_85403T0-p1.