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CAZyme Information: PHYCI_84458T0-p1

You are here: Home > Sequence: PHYCI_84458T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_84458T0-p1
CAZy Family GT20
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
162 17980.05 4.9370
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_84458T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 18 154 1.1e-37 0.5795918367346938

CDD Domains      help

PHYCI_84458T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.99e-99 1 158 1 158
7.01e-99 1 158 1 158
2.24e-98 1 158 1 158
2.24e-98 1 158 1 158
1.59e-97 1 158 60 217

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.19e-16 35 154 24 137
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_84458T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000357 0.999624 CS pos: 27-28. Pr: 0.9619

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_84458T0-p1.