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CAZyme Information: PHYCI_76849T0-p1

You are here: Home > Sequence: PHYCI_76849T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_76849T0-p1
CAZy Family GT2
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
805 PcinCBS144-22_SC0006|CGC2 89764.73 7.1223
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_76849T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM47 469 607 5.5e-19 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227511 ATS1 3.69e-30 159 448 94 388
Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton].
227511 ATS1 7.40e-19 181 449 59 335
Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton].
227511 ATS1 2.27e-18 162 335 275 440
Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton].
227511 ATS1 2.08e-17 197 445 19 275
Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton].
395335 RCC1 3.12e-11 189 244 1 50
Regulator of chromosome condensation (RCC1) repeat.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.13e-15 457 613 1352 1495
1.58e-13 457 611 203 340
1.58e-13 457 611 203 340
2.11e-13 457 611 131 272
2.61e-13 454 612 144 290

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.28e-25 163 454 105 372
Chain A, Ultraviolet-B receptor UVR8 [Arabidopsis thaliana],6XZM_B Chain B, Ultraviolet-B receptor UVR8 [Arabidopsis thaliana]
3.28e-25 163 454 105 372
Chain A, Ultraviolet-B receptor UVR8 [Arabidopsis thaliana],6XZN_B Chain B, Ultraviolet-B receptor UVR8 [Arabidopsis thaliana]
7.66e-25 163 454 102 369
Crystal structure of the W285F mutant of UVB-resistance protein UVR8 [Arabidopsis thaliana],4DNV_B Crystal structure of the W285F mutant of UVB-resistance protein UVR8 [Arabidopsis thaliana],4DNV_C Crystal structure of the W285F mutant of UVB-resistance protein UVR8 [Arabidopsis thaliana],4DNV_D Crystal structure of the W285F mutant of UVB-resistance protein UVR8 [Arabidopsis thaliana]
8.14e-25 163 454 102 369
Crystal structure of UVB-resistance protein UVR8 [Arabidopsis thaliana],4DNW_B Crystal structure of UVB-resistance protein UVR8 [Arabidopsis thaliana]
8.51e-25 163 454 101 368
Crystal structure of photoreceptor AtUVR8 mutant W285F and light-induced structural changes at 120K [Arabidopsis thaliana],4NC4_B Crystal structure of photoreceptor AtUVR8 mutant W285F and light-induced structural changes at 120K [Arabidopsis thaliana],4NC4_C Crystal structure of photoreceptor AtUVR8 mutant W285F and light-induced structural changes at 120K [Arabidopsis thaliana],4NC4_D Crystal structure of photoreceptor AtUVR8 mutant W285F and light-induced structural changes at 120K [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.61e-26 154 446 3002 3275
Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3
9.74e-26 177 435 29 270
Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens OX=9606 GN=HERC6 PE=1 SV=2
3.42e-24 154 527 2976 3351
E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
4.49e-24 154 527 2975 3350
E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
9.92e-24 163 454 113 380
Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000049 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_76849T0-p1.