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CAZyme Information: PHYCI_6235T0-p1

You are here: Home > Sequence: PHYCI_6235T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_6235T0-p1
CAZy Family GH81
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
284 29960.79 4.1786
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_6235T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 272 3.3e-68 0.926530612244898

CDD Domains      help

PHYCI_6235T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.46e-98 3 208 4 215
5.42e-97 3 208 4 215
5.42e-97 3 207 4 208
1.54e-96 3 208 4 215
1.54e-96 3 208 4 215

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.75e-12 23 197 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_6235T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000420 0.999548 CS pos: 22-23. Pr: 0.9657

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_6235T0-p1.