You are browsing environment: FUNGIDB
CAZyme Information: PHYCI_579510T0-p1
You are here: Home > Sequence: PHYCI_579510T0-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_579510T0-p1 | |||||||||||
| CAZy Family | GH81 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 70 | 385 | 7e-60 | 0.9569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.24e-65 | 73 | 386 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.11e-27 | 125 | 384 | 141 | 389 | polygalacturonase |
| 178580 | PLN03003 | 2.60e-22 | 73 | 352 | 51 | 337 | Probable polygalacturonase At3g15720 |
| 215120 | PLN02188 | 9.89e-22 | 123 | 346 | 122 | 348 | polygalacturonase/glycoside hydrolase family protein |
| 215426 | PLN02793 | 1.54e-21 | 123 | 346 | 143 | 368 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.47e-287 | 1 | 386 | 3 | 388 | |
| 3.51e-212 | 7 | 386 | 50 | 403 | |
| 7.57e-207 | 42 | 386 | 108 | 452 | |
| 1.25e-205 | 42 | 386 | 108 | 452 | |
| 1.44e-204 | 15 | 386 | 42 | 413 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.60e-63 | 55 | 386 | 8 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 8.85e-63 | 55 | 386 | 8 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 9.97e-63 | 57 | 386 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.19e-61 | 58 | 386 | 4 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
|
| 9.33e-60 | 58 | 386 | 3 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.35e-63 | 57 | 386 | 42 | 378 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
|
| 7.46e-63 | 57 | 386 | 42 | 378 | Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1 |
|
| 8.59e-62 | 56 | 386 | 44 | 380 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
|
| 1.44e-61 | 50 | 382 | 19 | 355 | Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PGU1 PE=1 SV=1 |
|
| 2.44e-61 | 58 | 386 | 35 | 368 | Probable endopolygalacturonase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000063 | 0.000001 |