logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHYCI_569133T0-p1

You are here: Home > Sequence: PHYCI_569133T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_569133T0-p1
CAZy Family GH81
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
188 20872.26 6.0521
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_569133T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 10 188 8.1e-66 0.6938775510204082

CDD Domains      help

PHYCI_569133T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.02e-131 1 188 1 188
3.29e-131 1 188 1 188
2.81e-119 1 188 1 188
1.45e-117 1 188 1 188
1.45e-117 1 188 1 188

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.01e-17 123 188 96 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_569133T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000254 0.999719 CS pos: 19-20. Pr: 0.9784

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_569133T0-p1.