CAZyme Information: PHYCI_555839T0-p1

Basic Information

• Species: Phytophthora cinnamomi
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
• CAZyme ID: PHYCI_555839T0-p1
• CAZy Family: GH72
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
778	PcinCBS144-22_SC0126|CGC2	85317.68	4.9252

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22	26201	1048749	70	26131

• Gene Location: location=PcinCBS144-22_SC0126:115997-118333(-)

Full Sequence      

MVKSLLGVALLSLPALVLAGGDVNLYDAQAQAIVDGFSTAEVLGQMTQLDLSTVMNGATR
TLNETAVRAFAKLNVGSYFNTYWGNQPINGSYSYSASEFRDIIQRIQEITMKENGGHPIV
YGIDSIHGAGYVTGAVMFPQEINSGASFNPDLIYEVGKVTARDTEAAGISWIFGPILDIS
QHSLWPRNYETFSEDPYLASVMGASYVRGLQSYNQTAACVKHFIGYSKTPTGHDRDGVEI
NDFDLLNYFMPPYKAAMEAGALSTMENYISINGEPVVASSKILKGLLRTDLGFDGVLVTD
WSEMYELQNWHRSYRTRQEAVSASLEHMSIDMNMVPLDTDFIEYGLKLLNENPDQEARLR
ESVKRIIKMKLQLRLYDNPMPGKDYVPMVGNDKDKKLALEMARESIVLLKNENNTLPLPK
SASVFLTGHSADNVGYQCGGWSVVWQGYSGNVMFKNGISVRQGLENVVGNDSFTYFNGLQ
ADGSISDADLAQTVKLASHHRYTIAAIGESTYAEKNGDIDDPALPEGQEKFIAALAATGT
KVIVVLFGGRPRLLGSIPDHAAAIIDGILPCELGGQAMAEILYGDVNPSGKLPITYPKDP
ANIAIPYNHRVTTRCMWDNCWMQWDFGAGLSYTQFNYSAVTLDKTTIAKADDTLTATVTV
SNTGSRAGKETVMLFLIQPYRKISVPEVKMLKKFKKIELRAGESKDVSFSLSSEDWGVYQ
PQIGRGLKRIVEDSNYVVAIKPDTWCNVYGDNITNPLCAEFTIDTSSGADTVSVGGHL

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	113	334	1.1e-61	0.9722222222222222

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	2.90e-111	6	744	9	754	beta-glucosidase BglX.
224389	BglX	4.41e-76	95	443	42	373	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	2.35e-57	48	367	8	314	Glycosyl hydrolase family 3 N terminal domain.
178629	PLN03080	2.77e-54	124	711	89	742	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	9.33e-49	406	632	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	0.0	1	773	1	772
UIZ29613.1|GH3	0.0	9	766	53	822
UIZ29432.1|GH3	0.0	9	766	8	766
CCA27737.1|GH3	1.55e-285	28	763	66	808
UIZ27116.1|GH3	2.76e-282	46	763	1	724

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	7.79e-118	43	715	30	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5TF0_A	5.24e-80	103	714	68	714	Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
5YOT_A	1.31e-79	41	740	29	741	Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A	1.31e-79	41	740	29	741	Chain A, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5Z87_A	1.91e-79	88	744	89	774	Chain A, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	5.42e-131	27	740	77	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	5.70e-117	43	715	52	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|Q56078|BGLX_SALTY	1.40e-84	100	714	87	728	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	1.58e-82	102	740	50	706	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|P33363|BGLX_ECOLI	1.92e-82	118	714	105	728	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000265	0.999684	CS pos: 19-20. Pr: 0.9767

TMHMM  Annotations     

There is no transmembrane helices in PHYCI_555839T0-p1.