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CAZyme Information: PHYCI_552480T0-p1

You are here: Home > Sequence: PHYCI_552480T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_552480T0-p1
CAZy Family GH72
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
187 21794.54 9.2557
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_552480T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT62 53 186 1.7e-21 0.5149253731343284

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397491 Anp1 1.70e-19 52 185 17 153
Anp1. The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins co-localize within the cis Golgi, and that they are physically associated in two distinct complexes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.68e-13 58 181 66 205
1.39e-10 58 184 85 213
1.39e-10 58 184 85 213
3.55e-10 45 181 82 231
1.85e-08 59 181 92 220

PDB Hits      help

PHYCI_552480T0-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.97e-07 78 186 113 229
Mannan polymerase II complex anp1 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=anp1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000040 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_552480T0-p1.