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CAZyme Information: PHYCI_3615T0-p1

You are here: Home > Sequence: PHYCI_3615T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_3615T0-p1
CAZy Family GH5|CBM43
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
249 PcinCBS144-22_SC0013|CGC2 26496.36 8.1414
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_3615T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 238 1.3e-51 0.8938775510204081

CDD Domains      help

PHYCI_3615T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.67e-127 1 243 1 262
7.00e-105 1 211 1 210
3.94e-28 11 200 9 198
3.94e-28 11 200 9 198
3.94e-28 11 200 9 198

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.70e-08 107 193 69 167
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_3615T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000230 0.999749 CS pos: 23-24. Pr: 0.9788

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_3615T0-p1.