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CAZyme Information: PHYCI_327641T0-p1

You are here: Home > Sequence: PHYCI_327641T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_327641T0-p1
CAZy Family GH53
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
262 PcinCBS144-22_SC0254|CGC1 28425.56 5.0483
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_327641T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 247 7.6e-70 0.9346938775510204

CDD Domains      help

PHYCI_327641T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.46e-172 1 262 1 265
5.92e-152 1 262 1 263
8.03e-150 1 262 1 263
9.35e-149 1 262 1 263
1.33e-148 1 262 1 263

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.61e-15 23 192 1 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_327641T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001426 0.998569 CS pos: 22-23. Pr: 0.8241

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_327641T0-p1.