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CAZyme Information: PHYCI_308292T0-p1

You are here: Home > Sequence: PHYCI_308292T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_308292T0-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
338 PcinCBS144-22_SC0032|CGC1 34305.37 3.4182
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_308292T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 2 172 1.7e-58 0.673469387755102

CDD Domains      help

PHYCI_308292T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.00e-113 1 337 58 417
1.66e-104 1 337 57 432
1.07e-102 1 337 57 432
1.07e-102 1 337 57 432
8.61e-102 1 337 57 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.57e-12 48 141 69 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_308292T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000040 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_308292T0-p1.