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CAZyme Information: PHYCI_306034T0-p1

You are here: Home > Sequence: PHYCI_306034T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_306034T0-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
524 PcinCBS144-22_SC0021|CGC1 58633.00 4.2625
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 36 507 2.8e-124 0.986013986013986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 3.02e-126 39 508 5 450
Glycosyl hydrolase family 1.
225343 BglB 1.27e-102 39 514 4 458
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 3.12e-81 35 503 24 477
beta-glucosidase
215455 PLN02849 1.38e-78 39 503 30 477
beta-glucosidase
184102 PRK13511 2.62e-76 36 508 2 465
6-phospho-beta-galactosidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.01e-186 37 516 30 520
3.14e-181 36 512 20 507
7.18e-180 31 510 5 495
2.22e-114 87 512 5 419
8.85e-88 37 502 2 449

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.62e-88 39 478 39 490
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
1.56e-79 39 509 5 462
Aphid myrosinase [Brevicoryne brassicae],1WCG_B Aphid myrosinase [Brevicoryne brassicae]
1.91e-79 39 514 11 453
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
2.87e-79 39 477 22 495
Crystal structure of native Raucaffricine glucosidase [Rauvolfia serpentina],4ATD_B Crystal structure of native Raucaffricine glucosidase [Rauvolfia serpentina],4ATL_A Crystal structure of Raucaffricine glucosidase in complex with Glucose [Rauvolfia serpentina],4ATL_B Crystal structure of Raucaffricine glucosidase in complex with Glucose [Rauvolfia serpentina]
2.88e-79 39 500 22 522
Crystal of Raucaffricine Glucosidase in complex with inhibitor [Rauvolfia serpentina],3ZJ6_B Crystal of Raucaffricine Glucosidase in complex with inhibitor [Rauvolfia serpentina],4A3Y_A Crystal structure of Raucaffricine glucosidase from ajmaline biosynthesis pathway [Rauvolfia serpentina],4A3Y_B Crystal structure of Raucaffricine glucosidase from ajmaline biosynthesis pathway [Rauvolfia serpentina]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.79e-87 39 502 37 505
Beta-glucosidase 32 OS=Arabidopsis thaliana OX=3702 GN=BGLU32 PE=2 SV=2
2.34e-85 32 478 67 521
Furcatin hydrolase OS=Viburnum furcatum OX=237940 PE=1 SV=1
1.16e-84 39 502 37 505
Beta-glucosidase 31 OS=Arabidopsis thaliana OX=3702 GN=BGLU31 PE=2 SV=1
2.60e-82 39 478 19 477
Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=BGLU26 PE=1 SV=1
4.73e-82 39 478 33 487
Beta-glucosidase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU24 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000316 0.999667 CS pos: 25-26. Pr: 0.9504

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_306034T0-p1.