CAZyme Information: PHYCI_29977T0-p1

Basic Information

• Species: Phytophthora cinnamomi
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
• CAZyme ID: PHYCI_29977T0-p1
• CAZy Family: PL38
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
863	PcinCBS144-22_SC0073|CGC1	96930.23	6.1253

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22	26201	1048749	70	26131

• Gene Location: location=PcinCBS144-22_SC0073:117109-120925(+)

Full Sequence      

MLRVARSVHRRRCHLVSASLSTNARPDSLLAYGARILRCTDHHEKVSLTFECQNRWDSDS
LPVFQEPKWGAHIPPDLPARGPKPELLPPKQMPNMKQLQTLASIPVIMLHALAHIELGAI
DNYWDTIVRFDPVEHKLPKEFYDDFLKVAADEARHFKMVDDRLRELGSEYGALPATRALL
EHVANTAADLAARIAVVPLVQEARGLDSGDRLVHRIKSMGDKASAKVVEQIVWEEREHVR
CGIKWFRHIAKVQNREKDMVAYFQELVLQFFPDGLPGPFDVEARLAADMGTEWYQPLESK
VAHSYPPQPRSEKDTKRSEVEQQGASVAAFAASKKKVILAGSVWPERTSSAAGVRSADII
SVLQERGYQVLCVSPSRLNDHTARLEEEQGVRCMQADANTDAFQKLLLETMPQLVVFDRF
IAEEMYGWQAKKYAPETLRVLDLQDVHFVRRARELAVKNHGARFEDTLDGKLLDITPVEK
LAIRELASIHRSDLTLYVSDFERDLLTSRFQVPDSGLQLCDFFYPEIDSTKLKSFDKRKD
IAFIGSFKHTPNVDAVEWTKTTLLPLFRKVGGEAEVHIYGSYGESKRFAKLDDPSQGFRM
KGFATNAHETLSQYRLSIAPLRFGAGIKGKIADSWFVGTPCVSTSIGSEGMTLEDAPWGG
AVADDPQMFVSEMQRLYTDEPSWNAANDASVSLCSTRYDRSRNADSFMNGVELAMSEKYA
LREQNWMGRILWSEKFRENHTNPDYGSTFAISMFSINGTESNSIATRDNWDTIKSYVYLE
EGWHGLEAYITGLTLDDGLDELVKMVAAAKPNTVVVLTKAGPVLMPWLNDVAAALEMLYP
SQEGGWATDNLLLGNSVLKAACP

Enzyme Prediction     

No EC number prediction in PHYCI_29977T0-p1.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
398135	DUF455	2.22e-98	38	295	1	243	Protein of unknown function (DUF455).
225389	COG2833	1.31e-54	35	299	11	264	Uncharacterized conserved protein, contains ferritin-like DUF455 domain [Function unknown].
153097	Ferritin_like	5.81e-15	108	246	2	130	Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).
340831	GT4_PimA-like	2.34e-12	336	709	1	363	phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
404563	Glyco_trans_1_4	2.89e-12	538	679	1	138	Glycosyl transferases group 1.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ27514.1|GT4	0.0	92	737	1	647
CCA13921.1|GT4	1.09e-124	289	737	1	438
QQT63886.1|GT4	6.14e-84	334	731	3	391
QEQ97801.1|GT4	6.02e-83	335	700	2	373
AFU98215.1|GT4	1.61e-82	334	737	2	394

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4I3G_A	1.10e-08	780	855	575	648	Crystal Structure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae],4I3G_B Crystal Structure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P43935|Y077_HAEIN	8.72e-21	83	287	62	265	Uncharacterized protein HI_0077 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0077 PE=4 SV=1
sp|P27034|BGLS_RHIRD	1.27e-07	761	855	534	628	Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000058	0.000002

TMHMM  Annotations     

There is no transmembrane helices in PHYCI_29977T0-p1.