logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PHYCI_251293T0-p1

You are here: Home > Sequence: PHYCI_251293T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_251293T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
594 PcinCBS144-22_SC0220|CGC1 66517.55 6.5913
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 26 515 6.6e-137 0.986013986013986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 7.24e-146 27 515 5 451
Glycosyl hydrolase family 1.
274539 BGL 1.54e-130 28 508 1 426
beta-galactosidase.
225343 BglB 2.10e-116 27 518 4 456
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 9.88e-89 27 508 28 476
beta-glucosidase
215455 PLN02849 1.38e-86 27 515 30 483
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.50e-247 2 517 3 515
2.51e-243 26 517 12 496
2.97e-225 23 518 19 507
9.61e-155 76 520 5 421
8.04e-106 27 520 4 458

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.65e-94 27 508 22 476
Chain A, Beta-glucosidase 42 [Arabidopsis thaliana]
6.04e-92 27 518 11 451
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
3.32e-91 27 508 39 501
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
1.75e-90 27 481 31 464
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
2.06e-90 18 515 3 471
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Tris [Neotermes koshunensis],3VIF_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with gluconolactone [Neotermes koshunensis],3VIG_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin [Neotermes koshunensis],3VIH_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glycerol [Neotermes koshunensis],3VII_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Bis-Tris [Neotermes koshunensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.68e-97 27 513 31 503
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
9.35e-95 27 510 37 507
Beta-glucosidase 32 OS=Arabidopsis thaliana OX=3702 GN=BGLU32 PE=2 SV=2
8.23e-94 27 508 21 475
Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1
1.19e-91 27 510 37 507
Beta-glucosidase 31 OS=Arabidopsis thaliana OX=3702 GN=BGLU31 PE=2 SV=1
2.39e-91 27 508 19 488
Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=BGLU26 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000479 0.999507 CS pos: 20-21. Pr: 0.9413

TMHMM  Annotations      download full data without filtering help

Start End
548 570