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CAZyme Information: PHYCI_249649T0-p1

You are here: Home > Sequence: PHYCI_249649T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_249649T0-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
418 PcinCBS144-22_SC0199|CGC1 47629.99 7.0339
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_249649T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT71 81 210 1.5e-23 0.4696969696969697

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
402574 Mannosyl_trans3 4.25e-09 94 274 15 242
Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.70e-95 81 415 132 515
4.19e-90 82 415 60 430
4.30e-72 81 321 66 358
1.60e-55 41 411 53 464
1.01e-46 81 386 65 435

PDB Hits      help

PHYCI_249649T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYCI_249649T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000027 0.000001

TMHMM  Annotations      download full data without filtering help

Start End
13 35