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CAZyme Information: PHYCI_242529T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_242529T0-p1 | |||||||||||
| CAZy Family | GH19 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 47 | 319 | 6.6e-75 | 0.9166666666666666 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395871 | Pectinesterase | 2.13e-47 | 40 | 314 | 2 | 272 | Pectinesterase. |
| 178113 | PLN02497 | 3.62e-46 | 37 | 320 | 31 | 306 | probable pectinesterase |
| 178372 | PLN02773 | 7.93e-45 | 41 | 321 | 6 | 283 | pectinesterase |
| 178051 | PLN02432 | 9.91e-45 | 40 | 320 | 13 | 272 | putative pectinesterase |
| 215367 | PLN02682 | 1.92e-43 | 31 | 320 | 63 | 347 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.94e-154 | 7 | 345 | 6 | 338 | |
| 3.84e-151 | 7 | 345 | 6 | 343 | |
| 5.85e-151 | 1 | 345 | 1 | 344 | |
| 8.30e-151 | 1 | 345 | 1 | 344 | |
| 3.64e-143 | 7 | 345 | 6 | 338 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.72e-63 | 49 | 344 | 16 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 5.72e-63 | 49 | 344 | 16 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 2.94e-31 | 40 | 314 | 11 | 279 | Pectin methylesterase from Carrot [Daucus carota] |
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| 1.03e-27 | 36 | 316 | 2 | 277 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 7.91e-12 | 138 | 308 | 155 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.72e-81 | 32 | 345 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 8.58e-79 | 32 | 344 | 20 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 2.00e-69 | 11 | 344 | 7 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
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| 2.00e-69 | 11 | 344 | 7 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1 |
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| 1.12e-68 | 9 | 344 | 8 | 324 | Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000311 | 0.999645 | CS pos: 21-22. Pr: 0.9756 |