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CAZyme Information: PHYCI_241043T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_241043T0-p1 | |||||||||||
| CAZy Family | GH17 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 178 | 282 | 9.1e-41 | 0.5454545454545454 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 1.03e-18 | 122 | 283 | 2 | 189 | Amb_all domain. |
| 226384 | PelB | 8.08e-08 | 97 | 287 | 51 | 280 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.96e-237 | 1 | 365 | 1 | 400 | |
| 6.33e-232 | 1 | 365 | 1 | 400 | |
| 2.25e-183 | 1 | 365 | 1 | 400 | |
| 5.04e-168 | 43 | 365 | 134 | 491 | |
| 1.21e-144 | 10 | 364 | 10 | 409 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.91e-69 | 24 | 362 | 4 | 358 | Pectin Lyase B [Aspergillus niger] |
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| 1.07e-65 | 25 | 323 | 5 | 321 | Pectin Lyase A [Aspergillus niger] |
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| 2.59e-63 | 25 | 323 | 5 | 321 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.57e-74 | 1 | 323 | 1 | 341 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 9.53e-74 | 7 | 321 | 6 | 338 | Pectin lyase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pel2 PE=1 SV=1 |
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| 9.53e-74 | 7 | 321 | 6 | 338 | Probable pectin lyase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelD PE=3 SV=1 |
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| 1.04e-73 | 8 | 323 | 6 | 340 | Probable pectin lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pelA PE=3 SV=2 |
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| 1.07e-73 | 25 | 323 | 24 | 341 | Probable pectin lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000200 | 0.999774 | CS pos: 21-22. Pr: 0.9764 |