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CAZyme Information: PHYCI_240914T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_240914T0-p1 | |||||||||||
| CAZy Family | GH17 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 122 | 314 | 1.8e-78 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 7.88e-34 | 121 | 313 | 2 | 186 | Amb_all domain. |
| 226384 | PelB | 3.63e-14 | 96 | 320 | 51 | 280 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.06e-203 | 2 | 321 | 3 | 322 | |
| 4.93e-178 | 2 | 430 | 3 | 440 | |
| 1.99e-177 | 2 | 430 | 3 | 440 | |
| 1.19e-173 | 10 | 367 | 11 | 367 | |
| 6.82e-173 | 10 | 367 | 11 | 367 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.65e-70 | 23 | 318 | 4 | 281 | Pectin Lyase B [Aspergillus niger] |
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| 2.46e-67 | 24 | 326 | 5 | 289 | Pectin Lyase A [Aspergillus niger] |
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| 1.14e-64 | 24 | 320 | 5 | 283 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.83e-82 | 9 | 325 | 9 | 308 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 7.83e-82 | 9 | 325 | 9 | 308 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 2.02e-78 | 1 | 315 | 1 | 297 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 5.03e-78 | 1 | 386 | 1 | 359 | Probable pectin lyase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelD PE=3 SV=1 |
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| 5.03e-78 | 1 | 386 | 1 | 359 | Pectin lyase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pel2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000197 | 0.999778 | CS pos: 20-21. Pr: 0.9793 |