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CAZyme Information: PHYCI_231786T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_231786T0-p1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 37 | 319 | 1e-68 | 0.9409722222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178051 | PLN02432 | 1.47e-42 | 36 | 318 | 10 | 272 | putative pectinesterase |
| 178113 | PLN02497 | 9.44e-38 | 34 | 339 | 31 | 327 | probable pectinesterase |
| 178372 | PLN02773 | 2.15e-37 | 31 | 318 | 1 | 282 | pectinesterase |
| 395871 | Pectinesterase | 7.77e-35 | 37 | 316 | 2 | 276 | Pectinesterase. |
| 215357 | PLN02665 | 3.86e-34 | 49 | 320 | 80 | 342 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.37e-217 | 1 | 343 | 1 | 343 | |
| 5.00e-157 | 1 | 343 | 1 | 338 | |
| 4.04e-153 | 1 | 343 | 1 | 344 | |
| 1.15e-152 | 1 | 343 | 1 | 344 | |
| 4.64e-148 | 6 | 343 | 7 | 348 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.44e-58 | 29 | 342 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 9.08e-58 | 29 | 342 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 5.34e-28 | 37 | 316 | 9 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 9.66e-27 | 34 | 316 | 3 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 2.51e-11 | 47 | 306 | 46 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.15e-75 | 29 | 342 | 20 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 6.49e-75 | 29 | 343 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 3.70e-66 | 29 | 342 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1 |
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| 1.04e-65 | 29 | 342 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
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| 1.04e-65 | 29 | 342 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000202 | 0.999772 | CS pos: 19-20. Pr: 0.9765 |