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CAZyme Information: PHYCI_231279T0-p1

You are here: Home > Sequence: PHYCI_231279T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_231279T0-p1
CAZy Family GH140
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 PcinCBS144-22_SC0067|CGC3 54030.63 5.7052
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 7 473 4.4e-173 0.9883449883449883

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
274539 BGL 0.0 9 465 1 426
beta-galactosidase.
395176 Glyco_hydro_1 0.0 7 474 4 453
Glycosyl hydrolase family 1.
225343 BglB 9.54e-167 5 478 1 459
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 5.73e-128 8 465 28 476
beta-glucosidase
215455 PLN02849 2.49e-115 8 472 30 483
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 478 1 477
1.59e-198 7 472 3 456
8.84e-198 8 473 4 457
9.93e-196 8 472 4 456
4.47e-195 7 472 3 456

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.89e-163 4 473 7 449
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
4.65e-161 2 476 25 488
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
6.31e-159 7 473 12 464
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
1.32e-143 8 471 20 481
Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGL_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_A Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],7BZM_A Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group],7BZM_B Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group]
1.88e-143 8 471 20 481
Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group],4QLL_B Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.87e-150 8 472 15 474
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1
3.59e-143 8 471 43 504
Beta-glucosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU7 PE=1 SV=1
8.07e-143 7 461 10 463
Beta-glucosidase 1B OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1B PE=1 SV=1
5.30e-142 8 472 44 510
Beta-glucosidase 44 OS=Arabidopsis thaliana OX=3702 GN=BGLU44 PE=2 SV=1
1.05e-141 8 472 35 499
Beta-glucosidase 43 OS=Arabidopsis thaliana OX=3702 GN=BGLU43 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000035 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_231279T0-p1.