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CAZyme Information: PHYCI_231148T0-p1

You are here: Home > Sequence: PHYCI_231148T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_231148T0-p1
CAZy Family GH140
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
487 54843.23 5.4380
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 4 474 5.1e-169 0.993006993006993

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
274539 BGL 0.0 8 466 1 426
beta-galactosidase.
395176 Glyco_hydro_1 0.0 6 475 4 453
Glycosyl hydrolase family 1.
225343 BglB 3.51e-160 4 474 1 454
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 1.15e-126 7 466 28 476
beta-glucosidase
215455 PLN02849 3.21e-116 7 466 30 476
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.57e-224 1 477 1 475
1.87e-177 5 474 2 457
6.12e-177 1 474 1 461
8.66e-177 5 477 4 463
1.57e-176 5 473 2 456

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.20e-156 2 472 26 482
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
6.52e-154 6 479 10 454
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
5.24e-148 1 466 16 476
Chain A, Beta-glucosidase 42 [Arabidopsis thaliana]
3.19e-144 7 470 20 479
Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group],4QLL_B Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose [Oryza sativa Japonica Group]
4.51e-144 7 470 20 479
Crystal structure of rice BGlu1 E176Q/Y341A mutant complexed with cellotetraose [Oryza sativa Japonica Group],4QLK_B Crystal structure of rice BGlu1 E176Q/Y341A mutant complexed with cellotetraose [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.61e-147 1 466 15 475
Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1
3.48e-143 7 470 43 502
Beta-glucosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU7 PE=1 SV=1
1.20e-142 7 466 37 502
Beta-glucosidase 40 OS=Arabidopsis thaliana OX=3702 GN=BGLU40 PE=2 SV=1
6.25e-140 7 466 50 515
Beta-glucosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU6 PE=1 SV=1
1.47e-139 7 478 15 479
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000064 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_231148T0-p1.