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CAZyme Information: PHYCI_231070T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_231070T0-p1 | |||||||||||
| CAZy Family | GH13 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 38 | 320 | 5.1e-70 | 0.9409722222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178051 | PLN02432 | 3.32e-44 | 36 | 318 | 10 | 272 | putative pectinesterase |
| 395871 | Pectinesterase | 4.01e-41 | 37 | 316 | 2 | 276 | Pectinesterase. |
| 178372 | PLN02773 | 5.23e-39 | 32 | 318 | 2 | 282 | pectinesterase |
| 178113 | PLN02497 | 6.90e-38 | 37 | 318 | 34 | 306 | probable pectinesterase |
| 215117 | PLN02176 | 1.80e-36 | 10 | 339 | 20 | 328 | putative pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.97e-204 | 1 | 343 | 1 | 343 | |
| 9.02e-153 | 1 | 343 | 1 | 338 | |
| 2.33e-152 | 1 | 343 | 1 | 344 | |
| 6.64e-152 | 1 | 343 | 1 | 344 | |
| 1.62e-148 | 1 | 343 | 1 | 338 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.44e-58 | 29 | 342 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 9.08e-58 | 29 | 342 | 3 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 7.57e-31 | 37 | 316 | 9 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 2.68e-28 | 37 | 316 | 7 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 1.40e-11 | 49 | 306 | 48 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.89e-76 | 29 | 343 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 5.76e-76 | 13 | 342 | 6 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 1.29e-63 | 29 | 342 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1 |
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| 2.86e-62 | 29 | 342 | 28 | 324 | Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1 |
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| 2.25e-61 | 29 | 342 | 28 | 324 | Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000207 | 0.999781 | CS pos: 19-20. Pr: 0.9755 |