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CAZyme Information: PHYCI_226710T0-p1

You are here: Home > Sequence: PHYCI_226710T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_226710T0-p1
CAZy Family GH12
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1557 PcinCBS144-22_SC0050|CGC1 173097.01 6.5849
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.257:6 2.4.1.132:6

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT4 1359 1511 6e-39 0.875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
340834 GT4_ALG2-like 3.60e-178 1152 1543 1 392
alpha-1,3/1,6-mannosyltransferase ALG2 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
399535 Myotub-related 1.46e-169 706 1034 8 330
Myotubularin-like phosphatase domain. This family represents the phosphatase domain within eukaryotic myotubularin-related proteins. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate. Mutations in gene encoding myotubularin-related proteins have been associated with disease.
350357 PTP-MTM-like 1.62e-118 764 994 1 226
protein tyrosine phosphatase-like domain of myotubularins. Myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively. Not all members are catalytically active proteins, some function as adaptors for the active members.
350380 PTP-MTMR6-like 1.94e-113 708 1019 1 301
protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatases 6, 7, and 8. This subgroup of enzymatically active phosphatase domains of myotubularins consists of MTMR6, MTMR7 and MTMR8, and related domains. Beside the phosphatase domain, they contain a C-terminal coiled-coil domain and an N-terminal PH-GRAM domain. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively. MTMR6, MTMR7 and MTMR8 form complexes with catalytically inactive MTMR9, and display differential substrate preferences. In cells, the MTMR6/R9 complex significantly increases the cellular levels of PtdIns(5)P, the product of PI(3,5)P(2) dephosphorylation, whereas the MTMR8/R9 complex reduces cellular PtdIns(3)P levels. The MTMR6/R9 complex serves to inhibit stress-induced apoptosis while the MTMR8/R9 complex inhibits autophagy.
350383 PTP-MTM1-like 2.65e-90 765 1018 2 249
protein tyrosine phosphatase-like domain of myotubularin, and myotubularin related phosphoinositide phosphatases 1 and 2. This subgroup of enzymatically active phosphatase domains of myotubularins consists of MTM1, MTMR1 and MTMR2. All contain an additional N-terminal PH-GRAM domain and C-terminal coiled-coiled domain and PDZ binding site. In general, myotubularins are a unique subgroup of protein tyrosine phosphatases that use inositol phospholipids, rather than phosphoproteins, as substrates. They dephosphorylate the D-3 position of phosphatidylinositol 3-phosphate [PI(3)P] and phosphatidylinositol 3,5-bisphosphate [PI(3,5)P2], generating phosphatidylinositol and phosphatidylinositol 5-phosphate [PI(5)P], respectively.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.64e-276 1105 1557 1 453
4.10e-153 1113 1549 8 447
6.52e-105 1151 1552 2 404
4.47e-103 1153 1543 4 397
9.60e-103 1151 1548 11 407

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.31e-106 542 1102 73 599
Chain A, Myotubularin-related protein 2 [Homo sapiens],1M7R_A Chain A, Myotubularin-related Protein-2 [Homo sapiens],1M7R_B Chain B, Myotubularin-related Protein-2 [Homo sapiens]
2.17e-105 542 1091 1 516
Chain A, Myotubularin-related protein 2 [Homo sapiens],1ZVR_A Chain A, Myotubularin-related protein 2 [Homo sapiens]
2.95e-105 547 1102 3 524
Myotubularin-related protein 2 [Homo sapiens],5GNH_B Myotubularin-related protein 2 [Homo sapiens]
9.82e-101 580 1098 29 519
Myotubularin-related proetin 1 [Homo sapiens],5C16_B Myotubularin-related proetin 1 [Homo sapiens],5C16_C Myotubularin-related proetin 1 [Homo sapiens],5C16_D Myotubularin-related proetin 1 [Homo sapiens]
2.17e-94 650 1092 68 505
Human Myotubularin related protein 6 (MTMR6) [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.23e-107 542 1102 70 596
Myotubularin-related protein 2 OS=Bos taurus OX=9913 GN=MTMR2 PE=2 SV=1
1.09e-106 542 1102 70 596
Myotubularin-related protein 2 OS=Homo sapiens OX=9606 GN=MTMR2 PE=1 SV=4
2.38e-106 580 1093 59 545
Myotubularin OS=Pongo abelii OX=9601 GN=MTM1 PE=2 SV=1
2.38e-106 580 1093 59 545
Myotubularin OS=Homo sapiens OX=9606 GN=MTM1 PE=1 SV=2
3.85e-106 542 1102 70 596
Myotubularin-related protein 2 OS=Mus musculus OX=10090 GN=Mtmr2 PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000092 0.000000

TMHMM  Annotations      download full data without filtering help

Start End
1110 1132
1225 1247