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CAZyme Information: PHYCI_225014T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_225014T0-p1 | |||||||||||
| CAZy Family | GH12 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA17 | 13 | 253 | 9.8e-54 | 0.963265306122449 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 237019 | PRK11907 | 7.69e-04 | 203 | 261 | 24 | 82 | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase. |
| 166942 | tatB | 0.001 | 204 | 268 | 80 | 139 | Sec-independent protein translocase subunit TatB. |
| 180536 | PRK06347 | 0.008 | 203 | 267 | 48 | 115 | 1,4-beta-N-acetylmuramoylhydrolase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.29e-128 | 3 | 272 | 6 | 267 | |
| 1.23e-127 | 3 | 272 | 6 | 267 | |
| 8.84e-127 | 2 | 186 | 1 | 185 | |
| 1.42e-126 | 3 | 272 | 6 | 267 | |
| 1.34e-74 | 10 | 191 | 16 | 192 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.29e-25 | 22 | 185 | 1 | 170 | Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000429 | 0.999557 | CS pos: 21-22. Pr: 0.9666 |