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CAZyme Information: PHYCI_224609T0-p1

You are here: Home > Sequence: PHYCI_224609T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_224609T0-p1
CAZy Family GH12
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
546 60838.01 4.2609
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 50 531 2.4e-128 0.9813519813519813

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 1.55e-135 51 532 5 450
Glycosyl hydrolase family 1.
225343 BglB 5.97e-113 51 540 4 460
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
274539 BGL 1.49e-111 52 526 1 426
beta-galactosidase.
215435 PLN02814 1.22e-81 44 500 24 462
beta-glucosidase
215455 PLN02849 2.51e-80 39 527 18 477
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.56e-196 50 536 22 507
1.16e-194 50 539 12 500
7.49e-194 50 540 31 520
1.01e-118 100 536 5 419
5.80e-95 51 511 45 509

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.12e-88 51 528 43 504
Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF6_B Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF7_A Structure of Strictosidine Glucosidase [Rauvolfia serpentina],2JF7_B Structure of Strictosidine Glucosidase [Rauvolfia serpentina],3ZJ7_A Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ7_B Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ8_A Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina],3ZJ8_B Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina]
1.19e-87 51 498 20 461
Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGL_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_A Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],7BZM_A Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group],7BZM_B Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group]
1.23e-87 51 511 39 499
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
3.31e-87 51 498 20 461
Crystal structure of rice BGlu1 E176Q mutant in complex with laminaribiose [Oryza sativa Japonica Group],3AHT_B Crystal structure of rice BGlu1 E176Q mutant in complex with laminaribiose [Oryza sativa Japonica Group],3AHV_A Semi-active E176Q mutant of rice bglu1 covalent complex with 2-deoxy-2-fluoroglucoside [Oryza sativa Japonica Group],3AHV_B Semi-active E176Q mutant of rice bglu1 covalent complex with 2-deoxy-2-fluoroglucoside [Oryza sativa Japonica Group],3F4V_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F4V_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5J_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5J_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5K_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5K_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5L_A Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],3F5L_B Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group]
4.66e-87 51 498 20 461
Crystal Structure of Rice BGlu1 E386G/S334A Mutant Complexed with Cellotetraose [Oryza sativa Japonica Group],3SCV_B Crystal Structure of Rice BGlu1 E386G/S334A Mutant Complexed with Cellotetraose [Oryza sativa Japonica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.45e-89 51 511 19 486
Beta-glucosidase 26, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=BGLU26 PE=1 SV=1
3.09e-88 51 511 37 503
Beta-glucosidase 31 OS=Arabidopsis thaliana OX=3702 GN=BGLU31 PE=2 SV=1
7.65e-88 51 526 40 504
Beta-glucosidase 17 OS=Arabidopsis thaliana OX=3702 GN=BGLU17 PE=2 SV=1
1.33e-87 51 500 31 485
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
1.61e-87 51 528 43 504
Strictosidine-O-beta-D-glucosidase OS=Rauvolfia serpentina OX=4060 GN=SGR1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000492 0.999462 CS pos: 22-23. Pr: 0.9633

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_224609T0-p1.