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CAZyme Information: PHYCI_222470T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_222470T0-p1 | |||||||||||
| CAZy Family | GH1 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH6 | 50 | 299 | 1.3e-58 | 0.9217687074829932 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396075 | Glyco_hydro_6 | 4.74e-42 | 50 | 304 | 2 | 292 | Glycosyl hydrolases family 6. |
| 227616 | CelA1 | 2.33e-17 | 67 | 376 | 158 | 462 | Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism]. |
| 282710 | PT | 1.61e-08 | 346 | 380 | 2 | 36 | PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat. |
| 282710 | PT | 2.73e-08 | 342 | 376 | 2 | 36 | PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat. |
| 282710 | PT | 8.16e-08 | 339 | 371 | 3 | 35 | PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.36e-159 | 6 | 342 | 2 | 333 | |
| 3.36e-88 | 28 | 337 | 22 | 338 | |
| 3.66e-83 | 32 | 323 | 21 | 320 | |
| 4.18e-83 | 29 | 334 | 20 | 327 | |
| 5.36e-80 | 25 | 325 | 10 | 303 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.28e-32 | 96 | 308 | 70 | 274 | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca] |
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| 2.41e-31 | 96 | 308 | 70 | 274 | Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca [Thermobifida fusca],2BOF_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose [Thermobifida fusca],2BOG_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside [Thermobifida fusca] |
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| 9.78e-29 | 96 | 308 | 73 | 280 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv] |
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| 9.78e-29 | 96 | 308 | 73 | 280 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv] |
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| 1.48e-28 | 96 | 308 | 94 | 301 | Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom [Mycobacterium tuberculosis H37Rv] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.82e-32 | 67 | 297 | 75 | 301 | Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1 |
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| 1.04e-30 | 96 | 308 | 101 | 305 | Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2 |
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| 8.43e-28 | 96 | 316 | 238 | 443 | Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1 |
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| 4.86e-25 | 65 | 308 | 113 | 348 | Endoglucanase 1 OS=Streptomyces sp. (strain KSM-9) OX=74575 GN=casA PE=1 SV=3 |
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| 2.15e-22 | 96 | 319 | 83 | 340 | Endoglucanase-6B OS=Humicola insolens OX=34413 GN=cel6B PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000257 | 0.999706 | CS pos: 29-30. Pr: 0.9738 |