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CAZyme Information: PHYCI_221747T0-p1

You are here: Home > Sequence: PHYCI_221747T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_221747T0-p1
CAZy Family GH1
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
296 PcinCBS144-22_SC0032|CGC3 30690.85 5.2366
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_221747T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 79 191 8e-18 0.6706586826347305

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 4.68e-06 23 192 1 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.83e-13 8 203 5 196
2.11e-11 12 198 7 190
1.50e-10 82 198 73 189
7.39e-10 8 201 5 198
1.41e-09 82 198 72 187

PDB Hits      help

PHYCI_221747T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYCI_221747T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000222 0.999764 CS pos: 22-23. Pr: 0.9766

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_221747T0-p1.