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CAZyme Information: PHYCI_212576T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_212576T0-p1 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 39 | 312 | 1.6e-66 | 0.9270833333333334 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 178051 | PLN02432 | 3.83e-46 | 36 | 315 | 8 | 272 | putative pectinesterase |
| 178113 | PLN02497 | 1.21e-41 | 39 | 336 | 34 | 327 | probable pectinesterase |
| 395871 | Pectinesterase | 6.28e-38 | 144 | 313 | 93 | 276 | Pectinesterase. |
| 215357 | PLN02665 | 2.30e-35 | 144 | 315 | 160 | 340 | pectinesterase family protein |
| 215367 | PLN02682 | 5.13e-35 | 72 | 315 | 104 | 347 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.59e-158 | 1 | 340 | 1 | 346 | |
| 1.40e-153 | 19 | 340 | 15 | 338 | |
| 5.67e-153 | 11 | 340 | 7 | 338 | |
| 9.20e-149 | 1 | 340 | 1 | 344 | |
| 5.29e-148 | 1 | 340 | 1 | 344 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.10e-58 | 29 | 339 | 1 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 2.97e-58 | 29 | 339 | 1 | 299 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 9.89e-31 | 32 | 313 | 4 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 4.86e-28 | 39 | 313 | 7 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 5.65e-12 | 58 | 303 | 57 | 366 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.08e-75 | 31 | 340 | 20 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 5.88e-75 | 31 | 339 | 20 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 1.35e-68 | 31 | 339 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
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| 1.35e-68 | 31 | 339 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1 |
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| 2.14e-67 | 31 | 339 | 28 | 324 | Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000577 | 0.999426 | CS pos: 23-24. Pr: 0.9554 |