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CAZyme Information: PHYCI_212483T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_212483T0-p1 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 35 | 314 | 4.7e-70 | 0.9305555555555556 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395871 | Pectinesterase | 4.73e-48 | 37 | 313 | 1 | 276 | Pectinesterase. |
| 178051 | PLN02432 | 1.10e-42 | 34 | 315 | 13 | 272 | putative pectinesterase |
| 178113 | PLN02497 | 5.93e-41 | 34 | 317 | 34 | 308 | probable pectinesterase |
| 178372 | PLN02773 | 8.00e-41 | 41 | 315 | 10 | 282 | pectinesterase |
| 215357 | PLN02665 | 3.42e-38 | 139 | 316 | 160 | 341 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.97e-164 | 1 | 340 | 1 | 346 | |
| 6.39e-164 | 1 | 340 | 1 | 338 | |
| 7.38e-160 | 1 | 340 | 1 | 344 | |
| 2.11e-159 | 1 | 340 | 1 | 344 | |
| 8.53e-155 | 6 | 340 | 7 | 348 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.20e-54 | 24 | 326 | 1 | 288 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
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| 8.73e-54 | 24 | 326 | 1 | 288 | Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
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| 1.90e-31 | 34 | 313 | 9 | 283 | Pectin methylesterase from Carrot [Daucus carota] |
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| 4.93e-30 | 44 | 313 | 13 | 279 | Chain A, Pectinesterase 1 [Solanum lycopersicum] |
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| 1.90e-10 | 70 | 278 | 74 | 327 | The structure of rice weevil pectin methyl esterase [Sitophilus oryzae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.19e-72 | 25 | 339 | 19 | 330 | Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1 |
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| 9.38e-71 | 9 | 340 | 5 | 330 | Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1 |
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| 2.52e-59 | 8 | 339 | 8 | 324 | Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1 |
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| 7.05e-59 | 26 | 339 | 28 | 324 | Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1 |
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| 1.40e-58 | 8 | 339 | 10 | 324 | Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000226 | 0.999749 | CS pos: 16-17. Pr: 0.9780 |