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CAZyme Information: PHYCI_207289T0-p1

You are here: Home > Sequence: PHYCI_207289T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_207289T0-p1
CAZy Family CBM13
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
426 48325.78 8.2956
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 80 398 3.7e-49 0.990909090909091

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 3.50e-26 80 398 2 349
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.04e-218 1 426 1 458
1.90e-75 77 413 34 354
1.24e-55 78 426 85 412
2.52e-48 62 426 42 385
1.09e-23 77 426 66 397

PDB Hits      help

PHYCI_207289T0-p1 has no PDB hit.

Swiss-Prot Hits      help

PHYCI_207289T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999949 0.000064

TMHMM  Annotations      download full data without filtering help

Start End
36 53