CAZyme Information: PHYCI_207269T0-p1

Basic Information

• Species: Phytophthora cinnamomi
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
• CAZyme ID: PHYCI_207269T0-p1
• CAZy Family: CBM13
• CAZyme Description: Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
755		89442.08	7.0600

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22	26201	1048749	70	26131

• Gene Location: location=PcinCBS144-22_SC0002:925336-927670(-)

Full Sequence      

MDERPMLRGIFAFEDEETPEWRRVVMSETSGGVPKFATKAECEDFIRKHCWRGSNPDFPK
LQHVFSMLVDWQQITEVLIPKIQEYDDKFPLEPAPEISGDNRFAQGEGVPIAEDVDYRVN
MPFHQRTNRESTFNTLRYLFFHMRCGIFVMIRRRRVVIFAPFANKDYENNWGENVTFDSS
DGSMFAYYREKQRYYRRENIIPDVNKWWANGNIICNEHCRYRNKEDETQYWGDQFLTQLR
DMLEDACKYRNIADCEFFINKRDYPHLKENLSEPYGFLFDKDDRNPDDDIPLTEHLYATY
APIMSFYVSKRFADIPFPCSEDWEAATGLVFPQSFRHTHCDQCPCRNPTHCDNDWECFCD
VGANGRKRHGIEGARDLFTANNFRKFYKPWEDKVNTAFFRGSATGGGTTIETNQRLHLAH
LSNTWKNDPTMNSEAERDAAGDKDQELVPLLNAEVTTWNLRDKKIAGKPMTFLRHEDFIF
EGGRQHFIPIYEQSKFKYILYVEGHCAANRYAFLMRLGSVILKVESRCVADEMWYYPVLK
PFEDHVPIKADLSDLAEKIQWCRDNDDKCQQIAARANELYEQFVSKEAIHDYMEIICNRV
AQRFQTTPTWYKRPEGVEAMKKPDLGRSRGMCVGGASARYCKRCLEMKDDDEEARAKRDR
ERETSRDNDRGRSYSSFNRDRDRDRSRDRDRDHYSRNDSRDYDRRDRGYGGGSDRDRYRR
DDKEREERSPKRPRVQQCRKCRRAKSACQCSFRGR

Enzyme Prediction     

No EC number prediction in PHYCI_207269T0-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT90	253	596	1.5e-29	0.948

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
214773	CAP10	1.64e-27	252	593	2	242	Putative lipopolysaccharide-modifying enzyme.
310354	Glyco_transf_90	8.11e-19	389	629	154	350	Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ26993.1|GT0	0.0	1	754	1	761
CCA22368.1|GT0	5.44e-174	2	648	4	604
ARF10830.1|GT90	9.35e-108	33	600	24	505
QEA08254.1|GT0	6.29e-66	128	611	81	532
UIB20781.1|GT0	6.29e-66	128	611	81	532

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5L0R_A	4.43e-13	252	594	94	332	human POGLUT1 in complex with Notch1 EGF12 and UDP [Homo sapiens],5L0S_A human POGLUT1 in complex with Factor VII EGF1 and UDP [Homo sapiens],5L0T_A human POGLUT1 in complex with EGF(+) and UDP [Homo sapiens],5L0U_A human POGLUT1 in complex with EGF(+) and UDP-phosphono-glucose [Homo sapiens],5L0V_A human POGLUT1 in complex with 2F-glucose modified EGF(+) and UDP [Homo sapiens],5UB5_A human POGLUT1 in complex with human Notch1 EGF12 S458T mutant and UDP [Homo sapiens]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|O55767|VF179_IIV6	7.14e-66	128	611	81	532	Uncharacterized protein 179R OS=Invertebrate iridescent virus 6 OX=176652 GN=IIV6-179R PE=4 SV=1
sp|Q197C5|VF179_IIV3	3.06e-56	36	609	7	500	Uncharacterized protein 035R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-035R PE=4 SV=1
sp|Q6GZU9|027R_FRG3G	1.78e-34	131	633	38	466	Uncharacterized protein 027R OS=Frog virus 3 (isolate Goorha) OX=654924 GN=FV3-027R PE=4 SV=1
sp|G5E897|PLGT3_MOUSE	7.35e-15	481	632	348	493	Protein O-glucosyltransferase 3 OS=Mus musculus OX=10090 GN=Poglut3 PE=1 SV=1
sp|Q7Z4H8|PLGT3_HUMAN	4.03e-14	390	624	304	489	Protein O-glucosyltransferase 3 OS=Homo sapiens OX=9606 GN=POGLUT3 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000053	0.000000

TMHMM  Annotations     

There is no transmembrane helices in PHYCI_207269T0-p1.