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CAZyme Information: PHYCI_196603T0-p1

You are here: Home > Sequence: PHYCI_196603T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_196603T0-p1
CAZy Family AA6
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
180 PcinCBS144-22_SC0009|CGC5 19561.91 4.8780
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_196603T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 178 1e-53 0.6530612244897959

CDD Domains      help

PHYCI_196603T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.27e-128 1 180 1 180
1.78e-122 1 180 1 180
5.09e-122 1 180 1 180
5.09e-122 1 180 1 180
2.69e-121 1 180 19 198

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.33e-17 23 176 1 152
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_196603T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000279 0.999697 CS pos: 22-23. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_196603T0-p1.