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CAZyme Information: PHYCI_157472T0-p1

You are here: Home > Sequence: PHYCI_157472T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_157472T0-p1
CAZy Family AA2
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
304 PcinCBS144-22_SC0032|CGC2 31713.77 4.1660
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_157472T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 7 258 2.6e-70 0.9591836734693877

CDD Domains      help

PHYCI_157472T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.48e-155 1 304 1 300
1.06e-137 2 304 5 301
2.38e-136 5 214 8 217
9.65e-136 5 214 8 217
9.65e-136 5 214 8 217

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.67e-17 20 194 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_157472T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000265 0.999696 CS pos: 19-20. Pr: 0.9790

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_157472T0-p1.