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CAZyme Information: PHYCI_147101T0-p1

You are here: Home > Sequence: PHYCI_147101T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_147101T0-p1
CAZy Family AA17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
142 14986.88 4.8726
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_147101T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 10 141 3.3e-40 0.5387755102040817

CDD Domains      help

PHYCI_147101T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.80e-73 5 142 2 137
6.86e-73 1 141 1 138
7.54e-73 1 142 1 139
1.04e-72 1 142 1 141
1.04e-72 1 142 1 141

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.01e-18 23 140 1 119
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_147101T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000260 0.999724 CS pos: 22-23. Pr: 0.9498

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_147101T0-p1.