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CAZyme Information: PHYCI_125848T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora cinnamomi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi | |||||||||||
| CAZyme ID | PHYCI_125848T0-p1 | |||||||||||
| CAZy Family | AA17 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 102 | 292 | 9.6e-83 | 0.9893048128342246 |
| PL1 | 566 | 757 | 6.8e-80 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 3.52e-37 | 101 | 295 | 2 | 190 | Amb_all domain. |
| 214765 | Amb_all | 3.89e-36 | 564 | 760 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 1.44e-16 | 96 | 291 | 82 | 273 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 226384 | PelB | 3.45e-14 | 482 | 764 | 47 | 281 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.13e-10 | 96 | 291 | 13 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.22e-186 | 1 | 509 | 28 | 534 | |
| 1.59e-173 | 460 | 844 | 176 | 564 | |
| 3.39e-170 | 469 | 786 | 29 | 346 | |
| 2.34e-144 | 1 | 273 | 23 | 296 | |
| 3.33e-127 | 1 | 376 | 25 | 399 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.91e-81 | 476 | 802 | 7 | 325 | Pectin Lyase B [Aspergillus niger] |
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| 5.54e-78 | 1 | 338 | 5 | 325 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 5.54e-78 | 1 | 338 | 5 | 325 | Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.72e-91 | 1 | 337 | 25 | 346 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
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| 2.72e-91 | 1 | 337 | 25 | 346 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 3.29e-91 | 5 | 336 | 29 | 343 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 7.88e-86 | 1 | 341 | 25 | 347 | Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelA PE=1 SV=2 |
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| 8.18e-85 | 1 | 376 | 24 | 379 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000055 | 0.000001 |