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CAZyme Information: PHYCI_125835T0-p1

You are here: Home > Sequence: PHYCI_125835T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_125835T0-p1
CAZy Family AA17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
210 22505.59 5.2481
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_125835T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 206 6.2e-52 0.7306122448979592

CDD Domains      help

PHYCI_125835T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.92e-125 12 210 11 209
4.02e-107 1 204 1 204
4.97e-30 13 203 8 195
4.98e-29 15 206 24 216
1.05e-28 14 202 11 187

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.91e-10 107 196 69 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_125835T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000267 0.999702 CS pos: 23-24. Pr: 0.9754

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_125835T0-p1.