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CAZyme Information: PHYCI_12045T0-p1

You are here: Home > Sequence: PHYCI_12045T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_12045T0-p1
CAZy Family AA17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
328 PcinCBS144-22_SC0093|CGC1 35097.44 4.1381
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.174:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 63 328 5.7e-30 0.42658730158730157

CDD Domains      help

PHYCI_12045T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.51e-65 32 327 43 327
3.62e-65 1 327 1 333
3.62e-65 1 327 1 333
9.06e-65 17 327 13 329
9.72e-64 32 327 58 342

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.36e-07 66 251 194 344
Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

PHYCI_12045T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000267 0.999696 CS pos: 22-23. Pr: 0.9528

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_12045T0-p1.