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CAZyme Information: PHYCI_117702T0-p1

You are here: Home > Sequence: PHYCI_117702T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_117702T0-p1
CAZy Family AA17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
427 45950.45 4.0611
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.174:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 17 313 7e-34 0.49007936507936506

CDD Domains      help

PHYCI_117702T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.92e-69 5 313 133 421
6.12e-68 5 311 118 421
7.66e-68 5 311 148 434
7.66e-68 5 311 148 434
9.98e-67 5 311 148 434

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.84e-08 15 350 262 536
Crystal structure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

PHYCI_117702T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999929 0.000103

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_117702T0-p1.