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CAZyme Information: PHYCI_112752T0-p1

You are here: Home > Sequence: PHYCI_112752T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_112752T0-p1
CAZy Family AA17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
385 PcinCBS144-22_SC0009|CGC3 39988.36 4.6254
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHYCI_112752T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 259 3.8e-62 0.9591836734693877

CDD Domains      help

PHYCI_112752T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.19e-136 1 310 1 307
9.44e-124 1 206 1 207
2.98e-123 1 206 1 207
3.81e-123 1 206 1 207
3.81e-123 1 206 1 207

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.02e-11 23 193 1 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_112752T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000248 0.999748 CS pos: 22-23. Pr: 0.9776

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_112752T0-p1.