CAZyme Information: PHYCI_106030T0-p1

Basic Information

• Species: Phytophthora cinnamomi
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
• CAZyme ID: PHYCI_106030T0-p1
• CAZy Family: AA16
• CAZyme Description: Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
281		29161.67	3.8728

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22	26201	1048749	70	26131

• Gene Location: location=PcinCBS144-22_SC0071:80179-81222(+)

Full Sequence      

MVSSSITFSAVAALAIAVQNVKAHGYMYIPLAEFDGTATSSWIVQISPQWSGDWDSCSSD
DSDCLTSVYTELKSSNGYSDIRTLLDSDTSLYGANCGYTDPDATAKDPPTTGDATFSRGM
VHVGPCEIWLDDTMVLSNDDCMTAYGDGTVDTKSVFTPVDYSSCSTSGCMLRFYWLAFQG
VDSEIVWQVYKDCVPLTGPAGGSSTSSTTTTSSTTSDTAASSTTENEADRATTTSATSGD
STTTASSATTTATRGLLPGNGNQGGNGWSGGFGGMGGGLRK

Enzyme Prediction     

EC	1.14.99.-:4

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA17	10	250	3.7e-66	0.9387755102040817

CDD Domains     

PHYCI_106030T0-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ETN19290.1|AA17	3.99e-135	1	202	1	201
ETP08632.1|AA17	3.89e-134	1	202	1	201
ETL32367.1|AA17	3.89e-134	1	202	1	201
ETI38720.1|AA17	3.18e-133	1	202	1	201
ETP08653.1|AA17	2.38e-118	1	202	1	202

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Z5Y_A	2.17e-69	24	198	1	172	Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits     

PHYCI_106030T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000338	0.999631	CS pos: 23-24. Pr: 0.9737

TMHMM  Annotations     

There is no transmembrane helices in PHYCI_106030T0-p1.