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CAZyme Information: PHYCI_103799T0-p1

You are here: Home > Sequence: PHYCI_103799T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora cinnamomi
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora cinnamomi
CAZyme ID PHYCI_103799T0-p1
CAZy Family AA1
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
310 31809.07 4.1346
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PcinnamomiCBS144-22 26201 1048749 70 26131
Gene Location Start: 180051; End:181071  Strand: -

Full Sequence      Download help

MVASATSFSA  LVATAALAAT  VSAHGYMSDP  AVKFLSSSTD  NTQFIATIES  SASGFTGSFS60
GSPADNTAAF  TKAFEASSYS  SLKELIDDKA  TVTVSDATLT  CGSCDPGETD  QPLPDTYVEW120
AHSDSEGFTS  SHEGPCEVWC  DDVRVFQDND  CAADYTSAPA  KLPFDHDACL  GTSTLTFYWL180
ALHSSTWQVY  VNCAPLESTT  STGATSKYAV  GTSSGTNAST  TSNSTSSTTS  TTSAPSVTTA240
ANTSSSASSA  TTSSAASSSY  NFQTNYATST  SASTSTDTTE  TTTAPAATTV  TPSVATSTDT300
SKCSVRRRRN  310

Enzyme Prediction      help

No EC number prediction in PHYCI_103799T0-p1.

CAZyme Signature Domains help

Created with Snap1531466277931081241391551701862012172322482632792943232AA17
Family Start End Evalue family coverage
AA17 12 275 8.4e-71 0.9346938775510204

CDD Domains      help

PHYCI_103799T0-p1 has no CDD domain.

CAZyme Hits      help

Created with Snap1531466277931081241391551701862012172322482632792941214EGZ08725.1|AA171214EGZ08724.1|AA171214ETI41722.1|AA171214ETI41723.1|AA171214ETN20047.1|AA17
Hit ID E-Value Query Start Query End Hit Start Hit End
EGZ08725.1|AA17 4.72e-125 1 214 1 213
EGZ08724.1|AA17 4.16e-121 1 214 1 214
ETI41722.1|AA17 4.64e-121 1 214 1 214
ETI41723.1|AA17 2.11e-120 1 214 1 213
ETN20047.1|AA17 2.11e-120 1 214 1 213

PDB Hits      download full data without filtering help

Created with Snap153146627793108124139155170186201217232248263279294241966Z5Y_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Z5Y_A 1.21e-13 24 196 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHYCI_103799T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000410 0.999557 CS pos: 23-24. Pr: 0.9714

TMHMM  Annotations      help

There is no transmembrane helices in PHYCI_103799T0-p1.