You are browsing environment: FUNGIDB
CAZyme Information: PHYBL_79267T0-p1
You are here: Home > Sequence: PHYBL_79267T0-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phycomyces blakesleeanus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Mucoromycetes; ; Phycomycetaceae; Phycomyces; Phycomyces blakesleeanus | |||||||||||
| CAZyme ID | PHYBL_79267T0-p1 | |||||||||||
| CAZy Family | GT39 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 41 | 372 | 2.5e-70 | 0.9753846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.77e-50 | 64 | 369 | 10 | 314 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 3.91e-40 | 4 | 365 | 52 | 417 | polygalacturonase ADPG |
| 178580 | PLN03003 | 1.01e-39 | 34 | 361 | 38 | 362 | Probable polygalacturonase At3g15720 |
| 215540 | PLN03010 | 8.32e-39 | 40 | 370 | 71 | 389 | polygalacturonase |
| 215426 | PLN02793 | 6.43e-38 | 34 | 356 | 67 | 394 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.49e-162 | 30 | 379 | 28 | 379 | |
| 1.05e-115 | 31 | 380 | 35 | 382 | |
| 1.05e-115 | 31 | 380 | 35 | 382 | |
| 5.74e-81 | 33 | 379 | 35 | 395 | |
| 3.00e-50 | 34 | 372 | 68 | 431 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.38e-34 | 20 | 369 | 14 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
|
| 3.39e-29 | 56 | 364 | 16 | 334 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 3.39e-29 | 56 | 364 | 16 | 334 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.56e-28 | 52 | 370 | 26 | 331 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
|
| 2.05e-28 | 56 | 364 | 8 | 326 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.55e-109 | 19 | 380 | 25 | 384 | Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1 |
|
| 7.91e-105 | 2 | 380 | 3 | 372 | Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg14 PE=1 SV=1 |
|
| 8.38e-105 | 3 | 380 | 4 | 362 | Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg13 PE=1 SV=1 |
|
| 1.93e-103 | 2 | 380 | 3 | 384 | Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1 |
|
| 5.33e-50 | 34 | 381 | 66 | 438 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000220 | 0.999755 | CS pos: 21-22. Pr: 0.9777 |