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CAZyme Information: PHYBL_14560T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phycomyces blakesleeanus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Mucoromycetes; ; Phycomycetaceae; Phycomyces; Phycomyces blakesleeanus | |||||||||||
| CAZyme ID | PHYBL_14560T0-p1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 41 | 368 | 7.1e-71 | 0.9661538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 5.05e-50 | 51 | 363 | 8 | 311 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.08e-45 | 47 | 368 | 78 | 388 | polygalacturonase |
| 177865 | PLN02218 | 1.85e-43 | 31 | 378 | 79 | 430 | polygalacturonase ADPG |
| 215426 | PLN02793 | 5.50e-41 | 32 | 366 | 61 | 406 | Probable polygalacturonase |
| 178580 | PLN03003 | 1.90e-40 | 50 | 359 | 57 | 361 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.14e-146 | 21 | 378 | 20 | 379 | |
| 7.38e-126 | 8 | 380 | 10 | 383 | |
| 7.38e-126 | 8 | 380 | 10 | 383 | |
| 1.66e-73 | 23 | 380 | 26 | 397 | |
| 2.27e-54 | 23 | 368 | 54 | 426 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.18e-36 | 17 | 368 | 11 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 5.01e-29 | 26 | 329 | 5 | 307 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 8.38e-28 | 52 | 363 | 34 | 334 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.38e-28 | 52 | 363 | 34 | 334 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.06e-27 | 52 | 363 | 26 | 327 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.27e-112 | 18 | 378 | 25 | 383 | Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1 |
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| 8.18e-105 | 9 | 378 | 11 | 383 | Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1 |
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| 3.52e-98 | 8 | 378 | 10 | 361 | Exopolygalacturonase rpg13 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg13 PE=1 SV=1 |
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| 7.51e-97 | 17 | 378 | 24 | 371 | Exopolygalacturonase rpg14 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg14 PE=1 SV=1 |
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| 4.04e-55 | 23 | 368 | 54 | 426 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000247 | 0.999700 | CS pos: 21-22. Pr: 0.9794 |