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CAZyme Information: PHPALM_9868-t46_1-p1

You are here: Home > Sequence: PHPALM_9868-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_9868-t46_1-p1
CAZy Family PL1
CAZyme Description Hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
288 30440.91 9.1708
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PHPALM_9868-t46_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 263 1.5e-70 0.9224489795918367

CDD Domains      help

PHPALM_9868-t46_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.27e-139 1 288 1 310
5.31e-138 1 288 1 310
1.18e-134 1 288 1 310
4.77e-134 1 288 1 310
2.12e-121 1 288 1 292

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.27e-15 70 205 43 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PHPALM_9868-t46_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000244 0.999740 CS pos: 24-25. Pr: 0.9785

TMHMM  Annotations      download full data without filtering help

Start End
7 29