CAZyme Information: PHPALM_9839-t46_1-p1

Basic Information

• Species: Phytophthora palmivora
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
• CAZyme ID: PHPALM_9839-t46_1-p1
• CAZy Family: PL1
• CAZyme Description: Glucan 1,3-beta-glucosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
586		65270.06	4.2101

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9	28185	N/A	3511	24674

• Gene Location: location=NCKW01005186:43-2452(-)

Full Sequence      

MFRSLLMLNTLVIATIATTFDSSDSSVDQYLGTVQVPGSDSESTHIQYSIRNGETTSKGV
NLGSWLVAEYWMTSSADFWTGAVNASQGEYTAIAEAIDPDAIRSHLEYHHSTFINESDIA
EIAAVGINTVRVPIGYWIVGFDDYDPSGKAEWKVYTNGTLKYLDLLVKDWAKKYNVAVLL
SVHAAKGSQNGADNSSPSVYGSEFWAEFAENVNNTISMVSYLADRYKNEDAFLGFGLLNE
PNGDTTTDVLYDYYEHVLTDFMLAPAYTNVWVEWHPYFVWGYDDVSDEDLVTTSVKVNFQ
GDMTQWNSVAGHNRLFIGEWCFVTNGKFENNEDLFYQFAQAETNVVNQAEGGWTYWSWRI
YEDETGDNMWSLRAVLRDDKLKSILFPSSSGSSSTVIISSSSGQEQQQTDNSTSTDQIQE
HILTTTQAAQESIDVTSKLRGLNKAVFILQQQYSVNSALTAGTKSVVSYRRLDETADASA
KANEVGASVRKAIKQLRGGNDKFYQDLITAIKITMCEQKVEKNRVRFVACTDDTAYLDDN
GDPVKVTISSLTDDETVEAYGAGQCEVMPNCYWDEIVEGDVTRAKV

Enzyme Prediction     

EC	-	-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH5	109	256	3.4e-32	0.46204620462046203

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225344	BglC	1.70e-25	58	248	19	198	Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
395098	Cellulase	1.10e-05	104	259	15	152	Cellulase (glycosyl hydrolase family 5).

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29069.1|GH5	5.13e-214	12	388	12	416
UIZ29004.1|GH5	2.14e-132	14	389	8	410
CCA17636.1|GH5	3.71e-102	40	385	121	498
AAM18484.1|GH5	1.25e-81	43	382	6	369
UJR33211.1|GH5	3.44e-79	45	376	29	381

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6ZB9_A	8.81e-23	58	290	4	214	Chain A, Exo-beta-1,3-glucanase [uncultured bacterium],6ZB9_B Chain B, Exo-beta-1,3-glucanase [uncultured bacterium]
1H4P_A	1.44e-22	58	359	14	372	Crystal structure of exo-1,3-beta glucanse from Saccharomyces cerevisiae [Saccharomyces cerevisiae],1H4P_B Crystal structure of exo-1,3-beta glucanse from Saccharomyces cerevisiae [Saccharomyces cerevisiae]
6ZB8_A	2.15e-22	58	290	4	214	Chain A, Exo-beta-1,3-glucanase variant E167Q/E295Q [uncultured bacterium],6ZB8_B Chain B, Exo-beta-1,3-glucanase variant E167Q/E295Q [uncultured bacterium]
1EQP_A	2.22e-22	58	359	10	360	Exo-b-(1,3)-glucanase From Candida Albicans [Candida albicans]
3O6A_A	2.35e-22	58	359	15	365	F144Y/F258Y Double Mutant of Exo-beta-1,3-glucanase from Candida albicans at 2 A [Candida albicans]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A2RAR6|EXGA_ASPNC	5.52e-29	58	380	43	358	Probable glucan 1,3-beta-glucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=exgA PE=3 SV=1
sp|Q12700|EXG_SCHOC	9.63e-28	59	359	44	392	Glucan 1,3-beta-glucosidase OS=Schwanniomyces occidentalis OX=27300 PE=3 SV=1
sp|Q96V64|EXG_BLUGR	5.97e-27	58	255	38	225	Glucan 1,3-beta-glucosidase OS=Blumeria graminis OX=34373 PE=3 SV=1
sp|Q5B5X8|EXGA_EMENI	1.51e-26	58	258	30	218	Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=exgA PE=3 SV=2
sp|A1CRV0|EXGA_ASPCL	1.73e-26	58	320	43	308	Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=exgA PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000446	0.999523	CS pos: 17-18. Pr: 0.9735

TMHMM  Annotations     

There is no transmembrane helices in PHPALM_9839-t46_1-p1.