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CAZyme Information: PHPALM_9835-t46_1-p1

You are here: Home > Sequence: PHPALM_9835-t46_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora palmivora
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora palmivora
CAZyme ID PHPALM_9835-t46_1-p1
CAZy Family PL1
CAZyme Description Glycoside hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
360 NCKW01005184|CGC1 40681.85 4.9911
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ppalmivorasbr112.9 28185 N/A 3511 24674
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:85 3.2.1.62:12 3.2.1.118:11 3.2.1.149:10 3.2.1.105:6 3.2.1.117:6 3.2.1.161:2 2.4.1.-:2 3.2.1.38:2 3.2.1.206:2 3.2.1.186:2 3.2.1.-:1 3.2.1.125:1 3.2.1.119:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 30 346 1.2e-99 0.6876456876456877

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 2.83e-112 32 347 5 308
Glycosyl hydrolase family 1.
225343 BglB 4.62e-90 32 358 4 320
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215455 PLN02849 4.14e-81 4 347 1 342
beta-glucosidase
215435 PLN02814 9.65e-81 10 346 6 339
beta-glucosidase
215539 PLN02998 1.62e-71 1 344 1 343
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.59e-154 21 359 2 338
7.45e-151 12 359 10 357
8.04e-131 17 354 8 343
8.40e-100 80 357 5 283
1.98e-80 13 337 12 341

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.99e-75 25 341 36 352
Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF6_B Structure of inactive mutant of Strictosidine Glucosidase in complex with strictosidine [Rauvolfia serpentina],2JF7_A Structure of Strictosidine Glucosidase [Rauvolfia serpentina],2JF7_B Structure of Strictosidine Glucosidase [Rauvolfia serpentina],3ZJ7_A Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ7_B Crystal structure of strictosidine glucosidase in complex with inhibitor-1 [Rauvolfia serpentina],3ZJ8_A Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina],3ZJ8_B Crystal structure of strictosidine glucosidase in complex with inhibitor-2 [Rauvolfia serpentina]
2.62e-73 16 347 19 356
Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ4_B Crystal structure of beta-primeverosidase [Camellia sinensis],3WQ5_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ5_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative [Camellia sinensis],3WQ6_A beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis],3WQ6_B beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative [Camellia sinensis]
3.64e-70 32 355 9 338
Chain A, Beta-glucosidase 18 [Oryza sativa Japonica Group],7D6A_B Chain B, Beta-glucosidase 18 [Oryza sativa Japonica Group],7D6B_A Chain A, Beta-glucosidase 18 [Oryza sativa Japonica Group],7D6B_B Chain B, Beta-glucosidase 18 [Oryza sativa Japonica Group]
9.19e-69 30 351 36 359
Different transition state conformations for the hydrolysis of beta-mannosides and beta-glucosides in the rice Os7BGlu26 family GH1 beta-mannosidase/beta-glucosidase [Oryza sativa Indica Group],4RE3_A Different transition state conformations for the hydrolysis of beta-mannosides and beta-glucosides in the rice Os7BGlu26 family GH1 beta-mannosidase/beta-glucosidase [Oryza sativa Indica Group],4RE4_A Different transition state conformations for the hydrolysis of beta-mannosides and beta-glucosides in the rice Os7BGlu26 family GH1 beta-mannosidase/beta-glucosidase [Oryza sativa Indica Group]
9.19e-69 30 351 36 359
Structural analysis and insights into glycon specificity of the rice GH1 Os7BGlu26 beta-D-mannosidase [Oryza sativa Indica Group],4JIE_A Structural analysis and insights into glycon specificity of the rice GH1 Os7BGlu26 beta-D-mannosidase [Oryza sativa Indica Group]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.21e-74 29 345 71 387
Furcatin hydrolase OS=Viburnum furcatum OX=237940 PE=1 SV=1
1.51e-74 11 352 75 424
Furostanol glycoside 26-O-beta-glucosidase OS=Hellenia speciosa OX=49577 GN=F26G PE=1 SV=1
4.11e-74 25 341 36 352
Strictosidine-O-beta-D-glucosidase OS=Rauvolfia serpentina OX=4060 GN=SGR1 PE=1 SV=1
5.87e-74 14 337 13 341
Beta-glucosidase 30 OS=Arabidopsis thaliana OX=3702 GN=BGLU30 PE=2 SV=1
1.02e-73 32 358 29 359
Beta-glucosidase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU27 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000235 0.999736 CS pos: 27-28. Pr: 0.9771

TMHMM  Annotations      help

There is no transmembrane helices in PHPALM_9835-t46_1-p1.